Home Browse SearchHelp DownloadGroup

.:: RNAiDB - Gene Page ::.
Gene Page - CG Number : CG10018
Gene Summary - CG10018:

CG10018: The gene Snm1 is referred to in FlyBase by the symbol Dmel\Snm1 (CG10018, FBgn0037338). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: hydrolase activity. Based on sequence similarity, it is predicted to be involved in the biological process: DNA repair. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Beta-lactamase-like; DNA repair metallo-beta-lactamase. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed within 00-06 hour embryonic stages, in adult female stages.

Gene summary for CG10018 is obtained from FlyBase (FB2013_01, released January 23rd, 2013)
Experimental Summary - CG10018:CG10018 is not perturbed in primary screen.
CG10018 is not tested in classification assay.
Cellular phenotyping(Images): Click here to access phenotyping images of gene CG10018.
Cell Count:
CG_NumberCategoryR1R2R3
CG10018Primary screen351849493
R1: Replicate No. 1; R2: Replicate No.2; R3: Replicate No. 3
Primary screen data - CG10018:
SNRNWNFint1Fint2Fint3Fint4FnumFmph1Fmph2Fmph3FclcTint1Tint2Tint3Tint4Rto1Rto2Rto3OktTnumTmph1Tmph2Tmph3TclcCellSize
1812020.079463994-0.0119196090.5441230550.2644821-0.778679741-1.175353366-0.705889627-1.721877711-1.963467603-0.119672362-0.794838733-0.2615996120.1281858640.627393232-1.026970005-0.335756064-0.860171717-0.890343798-1.235368287-2.0908985351.990753398-0.552640563-0.744119184
1821143.805896863-0.267745273-0.123343982.0629782810.1888862620.9094840110.9006917741.0466423661.9579428242.478745875-0.1447026471.1191090432.0262164660.1630981743.5262705560.3887132923.6883804653.7707973352.0500792731.287885176-0.5512315243.9793400846.152727302
183264-0.216319208-0.261589941-0.507910157-0.4296264030.2820626750.5332107230.5040535460.511930380.5494832310.741094194-0.2719600620.3378548190.2061857630.3487485470.349573599-0.267222205-0.611920446-0.548653577-0.3181923030.554732419-0.1760273450.4719904130.545456595
SN: Slide Number; RN: Replicate Number; WN: Well Number
Experimental Data (Classification Assay):CG10018 is not tested in classification assay
Integrated Annotations for CG10018 :Gene Ontology Annoations: Biological Process
Biological Process - TermGO IDEvidence
DNA repairGO:0006281inferred from sequence or structural similarity with SGD_LOCUS:PSO2; SGD:S0004745
Gene Ontology Annoations: Cellular Component
Cellular Component - TermGO IDEvidence
-
Gene Ontology Annoations: Molecular Function
Molecular Function - TermGO IDEvidence
hydrolase activityGO:0016787inferred from electronic annotation with InterPro:IPR001279
Other annotations
DatabaseLink
FlyBaseClick here to see CG10018 in FlyBase
FLIGHTClick here to see CG10018 in FLIGHT(Compendium of Drosophila in vivo and in vitro RNAi screens)
BioGRIDClick here to see CG10018 in BioGRID (Interaction Summary)
Off-targetClick here for Off-target data for CG10018
Entrez GeneEntrez Gene page for CG10018
UniprotUniprot page for CG10018

Endosite Team :
Prof. Satyajit Mayor (Contact : mayor@ancbs.res.in)
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)