Home Browse SearchHelp DownloadGroup

.:: RNAiDB - Gene Page ::.
Gene Page - CG Number : CG10756
Gene Summary - CG10756:

CG10756: The gene TBP-associated factor 13 is referred to in FlyBase by the symbol Dmel\Taf13 (CG10756, FBgn0032847). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity involved in preinitiation complex assembly. Based on sequence similarity, it is predicted to be involved in the biological process: transcription initiation from RNA polymerase II promoter. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Histone-fold; Transcription initiation factor IID, 18kDa subunit. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages.

Gene summary for CG10756 is obtained from FlyBase (FB2013_01, released January 23rd, 2013)
Experimental Summary - CG10756:CG10756 is not perturbed in primary screen.
CG10756 is not tested in classification assay.
Cellular phenotyping(Images): Click here to access phenotyping images of gene CG10756.
Cell Count:
CG_NumberCategoryR1R2R3
CG10756Primary screen74462441
R1: Replicate No. 1; R2: Replicate No.2; R3: Replicate No. 3
Primary screen data - CG10756:
SNRNWNFint1Fint2Fint3Fint4FnumFmph1Fmph2Fmph3FclcTint1Tint2Tint3Tint4Rto1Rto2Rto3OktTnumTmph1Tmph2Tmph3TclcCellSize
20161-0.5464141430.8663278091.8077449470.1550464551.0725703531.1878789531.0661507740.8049717321.766129388-0.3441227431.0982769670.3777179330.4888111880.192166292-0.024136933-0.2340630511.8606522071.5884802911.7461331732.294098112-0.0881510892.4838664042.070289343
2022251.7722768634.7115085584.7681301964.335712994-1.7972856242.360481339-1.7494737611.0181280060.2771928812.453291451-0.8604917440.8525500870.0142742720.9743597383.060385566-0.3038265473.0549658531.6017347451.470843106-0.941709171-0.741956625-1.523134176-1.183664037
203750.2248394150.602273961-0.083681611-0.2273228981.4934142722.1201085073.9721474031.588487862.0764096140.144656434-0.1310633470.5527562321.4937906351.3710229930.1001014011.1983331791.0069545360.9663259581.2177976582.3240417310.9741875420.8514481511.783401296
SN: Slide Number; RN: Replicate Number; WN: Well Number
Experimental Data (Classification Assay):CG10756 is not tested in classification assay
Integrated Annotations for CG10756 :Gene Ontology Annoations: Biological Process
Biological Process - TermGO IDEvidence
transcription initiation from RNA polymerase II promoterGO:0006367inferred from sequence or structural similarity AND inferred from sequence or structural similarity with HGNC_gene:TAF13; HGNC:11546; OMIM:600774
Gene Ontology Annoations: Cellular Component
Cellular Component - TermGO IDEvidence
transcription factor TFIID complexGO:0005669inferred from sequence or structural similarity with HGNC_gene:TAF13; HGNC:11546; OMIM:600774 AND inferred from sequence or structural similarity with SGD_LOCUS:TAF19; SGD:S0004564
Gene Ontology Annoations: Molecular Function
Molecular Function - TermGO IDEvidence
sequence-specific core promoter binding RNA polymerase II transcription factor activity involved in preinitiation complex assemblyGO:0001075contributes_to inferred from sequence or structural similarity with HGNC_gene:TAF13; HGNC:11546 inferred from sequence or structural similarity with SGD_LOCUS:TAF13; SGD:S000004564
DNA binding
Other annotations
DatabaseLink
FlyBaseClick here to see CG10756 in FlyBase
FLIGHTClick here to see CG10756 in FLIGHT(Compendium of Drosophila in vivo and in vitro RNAi screens)
BioGRIDClick here to see CG10756 in BioGRID (Interaction Summary)
Off-targetClick here for Off-target data for CG10756
Entrez GeneEntrez Gene page for CG10756
UniprotUniprot page for CG10756

Endosite Team :
Prof. Satyajit Mayor (Contact : mayor@ancbs.res.in)
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)