.:: RNAiDB - Gene Page ::. Gene Page - CG Number : CG10888Gene Summary - CG10888:CG10888: The gene Rhodopsin 3 is referred to in FlyBase by the symbol Dmel\Rh3 (CG10888, FBgn0003249). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: G-protein coupled photoreceptor activity. There is experimental evidence that it is involved in the biological process: phototransduction, UV; absorption of UV light. 18 alleles are reported. The phenotypes of these alleles are annotated with: eye photoreceptor cell; ommatidium. It has one annotated transcript and one annotated polypeptide. Protein features are: GPCR, rhodopsin-like; GPCR, rhodopsin-like, 7TM; Opsin; Opsin RH3/RH4. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of no expression detected. Peak expression observed in adult male stages. Gene summary for CG10888 is obtained from FlyBase (FB2013_01, released January 23rd, 2013)Experimental Summary - CG10888:CG10888 is not perturbed in primary screen. CG10888 is not tested in classification assay. Cellular phenotyping(Images): Click here to access phenotyping images of gene CG10888.Cell Count:CG_NumberCategoryR1R2R3CG10888Primary screen707684521R1: Replicate No. 1; R2: Replicate No.2; R3: Replicate No. 3Primary screen data - CG10888: SNRNWNFint1Fint2Fint3Fint4FnumFmph1Fmph2Fmph3FclcTint1Tint2Tint3Tint4Rto1Rto2Rto3OktTnumTmph1Tmph2Tmph3TclcCellSize2011151.485308230.1049333380.12893173-0.2556294420.154642903-0.547873501-0.272873377-0.213855321-1.0841559920.5416769052.413720785-0.2054945370.0600294610.5246383290.6501459270.101031585-0.0657599681.548013866-0.039552299-0.389987494-0.082778370.18086192-0.722247056202261-0.631705926-0.198667278-0.738798564-0.2643524530.443844477-0.769661983-0.338462958-0.51975082-1.1728729960.31297074-0.109436146-0.339203728-0.384236689-0.4111887650.80155570.5201427690.341662103-0.0877963012.740705359-1.172340557-0.2738519490.1254395110.52494718620351-0.317658045-0.4198351310.1153034610.5880054110.7404920851.3199174310.5451773991.4432504740.771363179-0.171217242-0.508584708-0.542114401-0.2729735580.104383338-0.4961755530.054545311-0.765495532-0.1473775431.9888115540.7776969681.7087031225.6914595551.044132203 SN: Slide Number; RN: Replicate Number; WN: Well NumberExperimental Data (Classification Assay):CG10888 is not tested in classification assayIntegrated Annotations for CG10888 :Gene Ontology Annoations: Biological ProcessBiological Process - TermGO IDEvidencephototransduction, UVGO:0007604inferred from direct assay phototransduction, UVGene Ontology Annoations: Cellular ComponentCellular Component - TermGO IDEvidenceintegral to membraneGO:0016021non-traceable author statement integral to membraneGene Ontology Annoations: Molecular FunctionMolecular Function - TermGO IDEvidenceG-protein coupled photoreceptor activityGO:0008020inferred from sequence or structural similarity with ninaE G-protein coupled photoreceptor activity Other annotations DatabaseLinkFlyBaseClick here to see CG10888 in FlyBaseFLIGHTClick here to see CG10888 in FLIGHT(Compendium of Drosophila in vivo and in vitro RNAi screens)BioGRIDClick here to see CG10888 in BioGRID (Interaction Summary)Off-targetClick here for Off-target data for CG10888Entrez GeneEntrez Gene page for CG10888UniprotUniprot page for CG10888 Endosite Team : Prof. Satyajit Mayor (Contact : mayor@ancbs.res.in) Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
.:: RNAiDB - Gene Page ::. Gene Page - CG Number : CG10888Gene Summary - CG10888:CG10888: The gene Rhodopsin 3 is referred to in FlyBase by the symbol Dmel\Rh3 (CG10888, FBgn0003249). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: G-protein coupled photoreceptor activity. There is experimental evidence that it is involved in the biological process: phototransduction, UV; absorption of UV light. 18 alleles are reported. The phenotypes of these alleles are annotated with: eye photoreceptor cell; ommatidium. It has one annotated transcript and one annotated polypeptide. Protein features are: GPCR, rhodopsin-like; GPCR, rhodopsin-like, 7TM; Opsin; Opsin RH3/RH4. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of no expression detected. Peak expression observed in adult male stages. Gene summary for CG10888 is obtained from FlyBase (FB2013_01, released January 23rd, 2013)Experimental Summary - CG10888:CG10888 is not perturbed in primary screen. CG10888 is not tested in classification assay. Cellular phenotyping(Images): Click here to access phenotyping images of gene CG10888.Cell Count:CG_NumberCategoryR1R2R3CG10888Primary screen707684521R1: Replicate No. 1; R2: Replicate No.2; R3: Replicate No. 3Primary screen data - CG10888: SNRNWNFint1Fint2Fint3Fint4FnumFmph1Fmph2Fmph3FclcTint1Tint2Tint3Tint4Rto1Rto2Rto3OktTnumTmph1Tmph2Tmph3TclcCellSize2011151.485308230.1049333380.12893173-0.2556294420.154642903-0.547873501-0.272873377-0.213855321-1.0841559920.5416769052.413720785-0.2054945370.0600294610.5246383290.6501459270.101031585-0.0657599681.548013866-0.039552299-0.389987494-0.082778370.18086192-0.722247056202261-0.631705926-0.198667278-0.738798564-0.2643524530.443844477-0.769661983-0.338462958-0.51975082-1.1728729960.31297074-0.109436146-0.339203728-0.384236689-0.4111887650.80155570.5201427690.341662103-0.0877963012.740705359-1.172340557-0.2738519490.1254395110.52494718620351-0.317658045-0.4198351310.1153034610.5880054110.7404920851.3199174310.5451773991.4432504740.771363179-0.171217242-0.508584708-0.542114401-0.2729735580.104383338-0.4961755530.054545311-0.765495532-0.1473775431.9888115540.7776969681.7087031225.6914595551.044132203 SN: Slide Number; RN: Replicate Number; WN: Well NumberExperimental Data (Classification Assay):CG10888 is not tested in classification assayIntegrated Annotations for CG10888 :Gene Ontology Annoations: Biological ProcessBiological Process - TermGO IDEvidencephototransduction, UVGO:0007604inferred from direct assay phototransduction, UVGene Ontology Annoations: Cellular ComponentCellular Component - TermGO IDEvidenceintegral to membraneGO:0016021non-traceable author statement integral to membraneGene Ontology Annoations: Molecular FunctionMolecular Function - TermGO IDEvidenceG-protein coupled photoreceptor activityGO:0008020inferred from sequence or structural similarity with ninaE G-protein coupled photoreceptor activity Other annotations DatabaseLinkFlyBaseClick here to see CG10888 in FlyBaseFLIGHTClick here to see CG10888 in FLIGHT(Compendium of Drosophila in vivo and in vitro RNAi screens)BioGRIDClick here to see CG10888 in BioGRID (Interaction Summary)Off-targetClick here for Off-target data for CG10888Entrez GeneEntrez Gene page for CG10888UniprotUniprot page for CG10888
CG10888: The gene Rhodopsin 3 is referred to in FlyBase by the symbol Dmel\Rh3 (CG10888, FBgn0003249). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: G-protein coupled photoreceptor activity. There is experimental evidence that it is involved in the biological process: phototransduction, UV; absorption of UV light. 18 alleles are reported. The phenotypes of these alleles are annotated with: eye photoreceptor cell; ommatidium. It has one annotated transcript and one annotated polypeptide. Protein features are: GPCR, rhodopsin-like; GPCR, rhodopsin-like, 7TM; Opsin; Opsin RH3/RH4. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of no expression detected. Peak expression observed in adult male stages.
Endosite Team : Prof. Satyajit Mayor (Contact : mayor@ancbs.res.in) Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)