Gene Page - CG Number : CG10888

Gene Summary - CG10888:

CG10888: The gene Rhodopsin 3 is referred to in FlyBase by the symbol Dmel\Rh3 (CG10888, FBgn0003249). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: G-protein coupled photoreceptor activity. There is experimental evidence that it is involved in the biological process: phototransduction, UV; absorption of UV light. 18 alleles are reported. The phenotypes of these alleles are annotated with: eye photoreceptor cell; ommatidium. It has one annotated transcript and one annotated polypeptide. Protein features are: GPCR, rhodopsin-like; GPCR, rhodopsin-like, 7TM; Opsin; Opsin RH3/RH4. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of no expression detected. Peak expression observed in adult male stages.

Gene summary for CG10888 is obtained from FlyBase (FB2013_01, released January 23rd, 2013)

Experimental Summary - CG10888:

CG10888 is not perturbed in primary screen.
CG10888 is not tested in classification assay.

Cellular phenotyping(Images):

Click here to access phenotyping images of gene CG10888.

Cell Count:

CG_Number	Category	R1	R2	R3
CG10888	Primary screen	707	684	521

R1: Replicate No. 1; R2: Replicate No.2; R3: Replicate No. 3

Primary screen data - CG10888:

SN	RN	WN	Fint1	Fint2	Fint3	Fint4	Fnum	Fmph1	Fmph2	Fmph3	Fclc	Tint1	Tint2	Tint3	Tint4	Rto1	Rto2	Rto3	Okt	Tnum	Tmph1	Tmph2	Tmph3	Tclc	CellSize
20	1	115	1.48530823	0.104933338	0.12893173	-0.255629442	0.154642903	-0.547873501	-0.272873377	-0.213855321	-1.084155992	0.541676905	2.413720785	-0.205494537	0.060029461	0.524638329	0.650145927	0.101031585	-0.065759968	1.548013866	-0.039552299	-0.389987494	-0.08277837	0.18086192	-0.722247056
20	2	261	-0.631705926	-0.198667278	-0.738798564	-0.264352453	0.443844477	-0.769661983	-0.338462958	-0.51975082	-1.172872996	0.31297074	-0.109436146	-0.339203728	-0.384236689	-0.411188765	0.8015557	0.520142769	0.341662103	-0.087796301	2.740705359	-1.172340557	-0.273851949	0.125439511	0.524947186
20	3	51	-0.317658045	-0.419835131	0.115303461	0.588005411	0.740492085	1.319917431	0.545177399	1.443250474	0.771363179	-0.171217242	-0.508584708	-0.542114401	-0.272973558	0.104383338	-0.496175553	0.054545311	-0.765495532	-0.147377543	1.988811554	0.777696968	1.708703122	5.691459555	1.044132203

SN: Slide Number; RN: Replicate Number; WN: Well Number

Experimental Data (Classification Assay):

CG10888 is not tested in classification assay

Integrated Annotations for CG10888 :

Gene Ontology Annoations: Biological Process

Biological Process - Term	GO ID	Evidence
phototransduction, UV	GO:0007604	inferred from direct assay phototransduction, UV

Gene Ontology Annoations: Cellular Component

Cellular Component - Term	GO ID	Evidence
integral to membrane	GO:0016021	non-traceable author statement integral to membrane

Gene Ontology Annoations: Molecular Function

Molecular Function - Term	GO ID	Evidence
G-protein coupled photoreceptor activity	GO:0008020	inferred from sequence or structural similarity with ninaE G-protein coupled photoreceptor activity

Other annotations

Database	Link
FlyBase	Click here to see CG10888 in FlyBase
FLIGHT	Click here to see CG10888 in FLIGHT(Compendium of Drosophila in vivo and in vitro RNAi screens)
BioGRID	Click here to see CG10888 in BioGRID (Interaction Summary)
Off-target	Click here for Off-target data for CG10888
Entrez Gene	Entrez Gene page for CG10888
Uniprot	Uniprot page for CG10888

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Endosite Team :
Prof. Satyajit Mayor (Contact : mayor@ancbs.res.in)
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)