Home Browse SearchHelp DownloadGroup

.:: RNAiDB - Gene Page ::.
Gene Page - CG Number : CG10909
Gene Summary - CG10909:

CG10909: This gene is referred to in FlyBase by the symbol Dmel\CG10909 (FBgn0038090). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: RNA binding; methyltransferase activity. Based on sequence similarity, it is predicted to be involved in the biological process: rRNA processing. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Fibrillarin. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of no expression detected. Peak expression observed at stages throughout the pupal period, in adult male stages.

Gene summary for CG10909 is obtained from FlyBase (FB2013_01, released January 23rd, 2013)
Experimental Summary - CG10909:CG10909 is perturbed in following parameters in primary screen: NuSize
CG10909 is not tested in classification assay.
Cellular phenotyping(Images): Click here to access phenotyping images of gene CG10909.
Cell Count:
CG10909Primary screen816722599
R1: Replicate No. 1; R2: Replicate No.2; R3: Replicate No. 3
Primary screen data - CG10909:
SN: Slide Number; RN: Replicate Number; WN: Well Number
Experimental Data (Classification Assay):CG10909 is not tested in classification assay
Integrated Annotations for CG10909 :Gene Ontology Annoations: Biological Process
Biological Process - TermGO IDEvidence
rRNA processingGO:0006364inferred from sequence or structural similarity with SGD_LOCUS:NOP1; SGD:S0002172
tRNA processing
Gene Ontology Annoations: Cellular Component
Cellular Component - TermGO IDEvidence
small nuclear ribonucleoprotein complexGO:0030532inferred from sequence or structural similarity AND inferred from sequence or structural similarity with SGD_LOCUS:NOP1; SGD:S0002172
Gene Ontology Annoations: Molecular Function
Molecular Function - TermGO IDEvidence
RNA bindingGO:0003723inferred from electronic annotation with InterPro:IPR000692
methyltransferase activity
Other annotations
FlyBaseClick here to see CG10909 in FlyBase
FLIGHTClick here to see CG10909 in FLIGHT(Compendium of Drosophila in vivo and in vitro RNAi screens)
BioGRIDClick here to see CG10909 in BioGRID (Interaction Summary)
Off-targetClick here for Off-target data for CG10909
Entrez GeneEntrez Gene page for CG10909
UniprotUniprot page for CG10909

Endosite Team :
Prof. Satyajit Mayor (Contact : mayor@ancbs.res.in)
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)