Home Browse SearchHelp DownloadGroup

.:: RNAiDB - Gene Page ::.
Gene Page - CG Number : CG11107
Gene Summary - CG11107:

CG11107: This gene is referred to in FlyBase by the symbol Dmel\CG11107 (FBgn0033160). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: ATP-dependent helicase activity; ATP-dependent RNA helicase activity; RNA helicase activity. There is experimental evidence that it is involved in the biological process: neurogenesis. 7 alleles are reported. The phenotype of these alleles is annotated with: mesothoracic tergum. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Domain of unknown function DUF1605; Helicase, C-terminal; Helicase, superfamily 1/2, ATP-binding domain; Helicase-associated domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages.

Gene summary for CG11107 is obtained from FlyBase (FB2013_01, released January 23rd, 2013)
Experimental Summary - CG11107:CG11107 is not perturbed in primary screen.
CG11107 is not tested in classification assay.
Cellular phenotyping(Images): Click here to access phenotyping images of gene CG11107.
Cell Count:
CG11107Primary screen329370529
R1: Replicate No. 1; R2: Replicate No.2; R3: Replicate No. 3
Primary screen data - CG11107:
SN: Slide Number; RN: Replicate Number; WN: Well Number
Experimental Data (Classification Assay):CG11107 is not tested in classification assay
Integrated Annotations for CG11107 :Gene Ontology Annoations: Biological Process
Biological Process - TermGO IDEvidence
nuclear mRNA splicing, via spliceosomeGO:0000398inferred from sequence or structural similarity with NCBI_NP:011395 AND inferred from sequence or structural similarity with SGD_LOCUS:PRP43; SGD:S0003088
nuclear mRNA splicing, via spliceosome
Gene Ontology Annoations: Cellular Component
Cellular Component - TermGO IDEvidence
spliceosomal complexGO:0005681inferred from sequence or structural similarity with SGD_LOCUS:PRP43; SGD:S0003088
precatalytic spliceosome
Gene Ontology Annoations: Molecular Function
Molecular Function - TermGO IDEvidence
RNA helicase activityGO:0003724inferred from sequence or structural similarity
ATP-dependent RNA helicase activity
Other annotations
FlyBaseClick here to see CG11107 in FlyBase
FLIGHTClick here to see CG11107 in FLIGHT(Compendium of Drosophila in vivo and in vitro RNAi screens)
BioGRIDClick here to see CG11107 in BioGRID (Interaction Summary)
Off-targetClick here for Off-target data for CG11107
Entrez GeneEntrez Gene page for CG11107
UniprotUniprot page for CG11107

Endosite Team :
Prof. Satyajit Mayor (Contact : mayor@ancbs.res.in)
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)