Home Browse SearchHelp DownloadGroup

.:: RNAiDB - Gene Page ::.
Gene Page - CG Number : CG11337
Gene Summary - CG11337:

CG11337: This gene is referred to in FlyBase by the symbol Dmel\CG11337 (FBgn0039846). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: polyribonucleotide nucleotidyltransferase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: RNA processing; mRNA catabolic process. 6 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. Protein features are: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; K Homology domain; K Homology domain, type 1; Nucleic acid-binding, OB-fold; Nucleic acid-binding, OB-fold-like; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; Polyribonucleotide nucleotidyltransferase; RNA-binding domain, S1; Ribosomal protein S1, RNA-binding domain; Ribosomal protein S5 domain 2-type fold. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages, during early larval stages.

Gene summary for CG11337 is obtained from FlyBase (FB2013_01, released January 23rd, 2013)
Experimental Summary - CG11337:CG11337 is not perturbed in primary screen.
CG11337 is not tested in classification assay.
Cellular phenotyping(Images): Click here to access phenotyping images of gene CG11337.
Cell Count:
CG_NumberCategoryR1R2R3
CG11337Primary screen494174594
R1: Replicate No. 1; R2: Replicate No.2; R3: Replicate No. 3
Primary screen data - CG11337:
SNRNWNFint1Fint2Fint3Fint4FnumFmph1Fmph2Fmph3FclcTint1Tint2Tint3Tint4Rto1Rto2Rto3OktTnumTmph1Tmph2Tmph3TclcCellSize
211560.0279174270.414149914-0.63923659-0.4353159130.530405036-0.477616561-0.488825274-0.4915324710.9540515660.745400299-0.7311648740.039698145-0.4982598820.4062148160.450699961-0.071389262-0.492091229-0.838522522-0.155702153-0.2575286341.4095573374.5879639554.607417582
2122001.118529878-0.374739198-0.60374063-0.621226527-1.688793748-1.213232528-1.737444881-1.870117037-2.4464443941.195906079-1.697441127-0.857625463-0.0086237792.4379472740.083502304-1.473379211-2.2489453790.441517577-1.216684996-3.2231134030.4779999992.2200935390.12564339
2131100.0015478820.088322371-0.069297761-1.1786732640.4781898590.444672730.2234984360.554447608-0.3807740810.398953814-0.9476337610.3689346050.4029689520.3952392791.1534159660.5525485510.262656878-0.840867205-1.0135016760.0557957541.0407881690.848481475-0.160643655
SN: Slide Number; RN: Replicate Number; WN: Well Number
Experimental Data (Classification Assay):CG11337 is not tested in classification assay
Integrated Annotations for CG11337 :Gene Ontology Annoations: Biological Process
Biological Process - TermGO IDEvidence
mRNA catabolic processGO:0006402inferred from electronic annotation with InterPro:IPR012162
RNA processing
Gene Ontology Annoations: Cellular Component
Cellular Component - TermGO IDEvidence
-
Gene Ontology Annoations: Molecular Function
Molecular Function - TermGO IDEvidence
polyribonucleotide nucleotidyltransferase activityGO:0004654inferred from sequence or structural similarity with SUBTILIST:BG11491
3'-5'-exoribonuclease activity
Other annotations
DatabaseLink
FlyBaseClick here to see CG11337 in FlyBase
FLIGHTClick here to see CG11337 in FLIGHT(Compendium of Drosophila in vivo and in vitro RNAi screens)
BioGRIDClick here to see CG11337 in BioGRID (Interaction Summary)
Off-targetClick here for Off-target data for CG11337
Entrez GeneEntrez Gene page for CG11337
UniprotUniprot page for CG11337

Endosite Team :
Prof. Satyajit Mayor (Contact : mayor@ancbs.res.in)
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)