Home Browse SearchHelp DownloadGroup

.:: RNAiDB - Gene Page ::.
Gene Page - CG Number : CG12007
Gene Summary - CG12007:

CG12007: This gene is referred to in FlyBase by the symbol Dmel\CG12007 (FBgn0037293). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: Rab geranylgeranyltransferase activity. There is experimental evidence that it is involved in the biological process: regulation of cell shape; cell adhesion; neurogenesis. 5 alleles are reported. The phenotype of these alleles is annotated with: tormogen cell. It has one annotated transcript and one annotated polypeptide. Protein features are: Protein prenyltransferase; Protein prenyltransferase, alpha subunit. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages, during late larval stages, during early pupal stages.

Gene summary for CG12007 is obtained from FlyBase (FB2013_01, released January 23rd, 2013)
Experimental Summary - CG12007:CG12007 is not perturbed in primary screen.
CG12007 is not tested in classification assay.
Cellular phenotyping(Images): Click here to access phenotyping images of gene CG12007.
Cell Count:
CG_NumberCategoryR1R2R3
CG12007Primary screen277229233
R1: Replicate No. 1; R2: Replicate No.2; R3: Replicate No. 3
Primary screen data - CG12007:
SNRNWNFint1Fint2Fint3Fint4FnumFmph1Fmph2Fmph3FclcTint1Tint2Tint3Tint4Rto1Rto2Rto3OktTnumTmph1Tmph2Tmph3TclcCellSize
22155-0.3132078880.095684485-0.2788467191.9691268261.2494432781.7100872262.6448218871.3298773131.8686812610.6945721960.9623392670.3767843811.2095878280.874479178-0.1670839111.7053200452.5790542971.2577816931.8001971342.023250022.916966687-0.6633126930.548064926
2222010.6897776372.211643737-0.0195102660.3488454930.1979657380.5202843530.802260030.6319596470.6983957540.138943041-0.011395504-0.5757598190.4989802870.8499276820.5593173330.6711137491.2264211041.4413198810.926246360.879306702-0.125452089-0.7892130640.967395634
2231111.0668291880.1968687150.488751516-0.4003706611.0122051851.2664054452.6884001811.5178481511.9798858710.2436131760.674393764-0.2303978571.1194333491.3055789220.2042036621.6695600121.3109325461.0138131331.3729692181.7520762890.2435971410.6157491842.123255559
SN: Slide Number; RN: Replicate Number; WN: Well Number
Experimental Data (Classification Assay):CG12007 is not tested in classification assay
Integrated Annotations for CG12007 :Gene Ontology Annoations: Biological Process
Biological Process - TermGO IDEvidence
cell adhesionGO:0007155inferred from mutant phenotype
regulation of cell shape
Gene Ontology Annoations: Cellular Component
Cellular Component - TermGO IDEvidence
Rab-protein geranylgeranyltransferase complexGO:0005968inferred from sequence or structural similarity with UniProtKB:Q08602
Gene Ontology Annoations: Molecular Function
Molecular Function - TermGO IDEvidence
Rab geranylgeranyltransferase activityGO:0004663inferred from sequence or structural similarity with UniProtKB:Q08602
Other annotations
DatabaseLink
FlyBaseClick here to see CG12007 in FlyBase
FLIGHTClick here to see CG12007 in FLIGHT(Compendium of Drosophila in vivo and in vitro RNAi screens)
BioGRIDClick here to see CG12007 in BioGRID (Interaction Summary)
Off-targetClick here for Off-target data for CG12007
Entrez GeneEntrez Gene page for CG12007
UniprotUniprot page for CG12007

Endosite Team :
Prof. Satyajit Mayor (Contact : mayor@ancbs.res.in)
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)