| CG Number | Fbgn ID | Gene Name | Symbol |
|---|
| CG1088 | FBgn0015324 | Vacuolar H[+]-ATPase 26kD E subunit | Vha26 |
| CG1100 | FBgn0028690 | Regulatory particle non-ATPase 5 | Rpn5 |
| CG1250 | FBgn0037357 | | |
| CG1341 | FBgn0028687 | Regulatory particle triple-A ATPase 1 | Rpt1 |
| CG1404 | FBgn0020255 | ran | ran |
| CG1489 | FBgn0020369 | Pros45 | Pros45 |
| CG1499 | FBgn0039852 | nyobe | nyo |
| CG1519 | FBgn0023175 | Proteasome alpha7 subunit | Prosalpha7 |
| CG1685 | FBgn0015527 | penguin | pen |
| CG33071 | FBgn0064117 | - | CG33714 |
| CG1746 | FBgn0039830 | - | CG1746 |
| CG1942 | FBgn0033215 | - | CG1942 |
| CG1994 | FBgn0027330 | lethal (1) G0020 | l(1)G0020 |
| CG2028 | FBgn0015024 | Casein kinase Ialpha | CkIalpha |
| CG32484 | FBgn0052484 | Sphingosine kinase 2 | Sk2 |
| CG2512 | FBgn0003885 | alpha-Tubulin at 84D | alphaTub84D |
| CG2746 | FBgn0002607 | Ribosomal protein L19 | RpL19 |
| CG2807 | FBgn0031266 | - | CG2807 |
| CG2925 | FBgn0014366 | noisette | noi |
| CG2956 | FBgn0003900 | twist | twi |
| CG2960 | FBgn0003941 | Ribosomal protein L40 | RpL40 |
| CG2982 | FBgn0029704 | - | CG2982 |
| CG3009 | FBgn0029720 | - | CG3009 |
| CG3093 | FBgn0000482 | deep orange | dor |
| CG3314 | FBgn0014026 | Ribosomal protein L7A | RpL7A |
| CG3403 | FBgn0033094 | | |
| CG3416 | FBgn0002787 | Mov34 | Mov34 |
| CG3427 | FBgn0085421 | Epac | Epac |
| CG3455 | FBgn0028685 | Regulatory particle triple-A ATPase 4 | Rpt4 |
| CG3456 | FBgn0023549 | Monocarboxylate transporter 1 | Mct1 |
| CG3605 | FBgn0031493 | - | CG3605 |
| CG3664 | FBgn0014010 | Rab-protein 5 | Rab5 |
| CG3733 | FBgn0016132 | | |
| CG4064 | FBgn0029808 | | |
| CG4097 | FBgn0002284 | Proteasome 26kD subunit | Pros26 |
| CG4916 | FBgn0004419 | maternal expression at 31B | me31B |
| CG5348 | FBgn0034156 | - | CG5348 |
| CG5378 | FBgn0028688 | Regulatory particle non-ATPase 7 | Rpn7 |
| CG6061 | FBgn0033846 | Myb-interacting protein 120 | mip120 |
| CG7158 | FBgn0037116 | - | CG7158 |
| CG7528 | FBgn0029113 | Smt3 activating enzyme 2 | Uba2 |
| CG7756 | FBgn0001217 | Heat shock protein cognate 2 | Hsc70-2 |
| CG7762 | FBgn0028695 | Regulatory particle non-ATPase 1 | Rpn1 |
| CG7996 | FBgn0003450 | snake | snk |
| CG8055 | FBgn0086656 | shrub | shrb |
| CG8078 | FBgn0033375 | - | CG8078 |
| CG8093 | FBgn0033999 | - | CG8093 |
| CG8465 | FBgn0028343 | lethal (1) G0222 | l(1)G0222 |
| CG8593 | FBgn0019662 | quemao | qm |
| CG8598 | FBgn0035766 | eco | eco |
| CG8610 | FBgn0012058 | Cdc27 | Cdc27 |
| CG8651 | FBgn0003862 | trithorax | trx |
| CG9311 | FBgn0036448 | myopic | mop |
| CG9345 | FBgn0038173 | Adenosine deaminase-related growth factor C | Adgf-C |
| CG9575 | FBgn0031090 | Rab35 | Rab35 |
| CG9677 | FBgn0025582 | Int6 homologue | Int6 |
| CG9834 | FBgn0034433 | endophilin B | endoB |
| CG9864 | FBgn0034490 | - | CG9864 |
| CG10221 | FBgn0028475 | - | Hrd3 |
| CG10366 | FBgn0032814 | - | CG10366 |
| CG10370 | FBgn0028684 | Tat-binding protein-1 | Tbp-1 |
| CG10484 | FBgn0000486 | | |
| CG10580 | FBgn0011591 | fringe | fng |
| CG10910 | FBgn0034289 | - | CG10910 |
| CG10938 | FBgn0016697 | Proteasome alpha5 subunit | Prosalpha5 |
| CG11621 | FBgn0015278 | Phosphotidylinositol 3 kinase 68D | Pi3K68D |
| CG11888 | FBgn0028692 | Regulatory particle non-ATPase 2 | Rpn2 |
| CG11981 | FBgn0026380 | Proteasome beta3 subunit | Prosbeta3 |
| CG12000 | FBgn0037314 | | |
| CG12030 | FBgn0035147 | UDP-galactose 4'-epimerase | Gale |
| CG12072 | FBgn0011739 | warts | wts |
| CG12215 | FBgn0033494 | KCNQ potassium channel | KCNQ |
| CG12320 | FBgn0038590 | - | CG12320 |
| CG12340 | FBgn0027499 | windei | wde |
| CG12539 | FBgn0030586 | - | CG12539 |
| CG14542 | FBgn0039402 | vps2 | vps2 |
| CG14724 | FBgn0019624 | Cytochrome c oxidase subunit Va | CoVa |
| CG14792 | FBgn0003517 | stubarista | sta |
| CG14804 | FBgn0014411 | Vacuolar protein sorting 26 | Vps26 |
| CG14884 | FBgn0027053 | COP9 complex homolog subunit 5 | CSN5 |
| CG15151 | FBgn0032661 | | |
| CG15433 | FBgn0031604 | Elongator complex protein 3 | Elp3 |
| CG15504 | FBgn0039683 | doublesex-Mab related 99B | dmrt99B |
| CG15667 | FBgn0026369 | Smad anchor for receptor activation | Sara |
| CG15835 | FBgn0033233 | Histone demethylase 4A | Kdm4A |
| CG16827 | FBgn0034005 | alphaPS4 | alphaPS4 |
| CG16840 | FBgn0032329 | Arginine methyltransferase 8 | Art8 |
| CG16868 | FBgn0034498 | - | CG16868 |
| CG16941 | FBgn0038464 | - | CG16941 |
| CG16983 | FBgn0025637 | skpA | skpA |
| CG17331 | FBgn0032596 | - | CG17331 |
