| CG Number | Fbgn ID | Gene Name | Symbol |
|---|
| CG1064 | FBgn0011715 | Snf5-related 1 | Snr1 |
| CG1065 | FBgn0004888 | Succinyl coenzyme A synthetase alpha subunit | Scsalpha |
| CG1685 | FBgn0015527 | penguin | pen |
| CG2807 | FBgn0031266 | - | CG2807 |
| CG2956 | FBgn0003900 | twist | twi |
| CG2960 | FBgn0003941 | Ribosomal protein L40 | RpL40 |
| CG2982 | FBgn0029704 | - | CG2982 |
| CG3605 | FBgn0031493 | - | CG3605 |
| CG3707 | FBgn0004655 | wings apart-like | wapl |
| CG3780 | FBgn0015818 | Spliceosomal protein on the X | Spx |
| CG3949 | FBgn0015393 | hoi-polloi | hoip |
| CG5271 | FBgn0003942 | Ribosomal protein S27A | RpS27A |
| CG5661 | FBgn0028679 | | |
| CG6383 | FBgn0086905 | | |
| CG7756 | FBgn0001217 | Heat shock protein cognate 2 | Hsc70-2 |
| CG8055 | FBgn0086656 | shrub | shrb |
| CG8494 | FBgn0033916 | - | CG8494 |
| CG8887 | FBgn0005386 | absent, small, or homeotic discs 1 | ash1 |
| CG10669 | FBgn0039329 | - | CG10669 |
| CG10804 | FBgn0029663 | - | CG10804 |
| CG10910 | FBgn0034289 | - | CG10910 |
| CG11290 | FBgn0034975 | enoki mushroom | enok |
| CG11913 | FBgn0039331 | - | CG11913 |
| CG13098 | FBgn0032053 | mitochondrial ribosomal protein L51 | mRpL51 |
| CG13387 | FBgn0020497 | embargoed | emb |
| CG17369 | FBgn0005671 | Vacuolar H[+]-ATPase 55kD B subunit | Vha55 |
| CG17370 | FBgn0039381 | - | CG17370 |
| CG17520 | FBgn0000258 | | |
| CG17559 | FBgn0024245 | doughnut on 2 | dnt |
| CG17970 | FBgn0031694 | Cyp4ac2 | Cyp4ac2 |
| CG18783 | FBgn0028420 | Kruppel homolog 1 | Kr-h1 |
